This particular problem occurs when playing ADOM in a window, activating another window and then clicking back into the ADOM window in order to continue playing. The problem is that the click does not only activate the window, but also move the character into a certain direction or makes him wait a turn when I click at his position. Actually that way I wasted turns in more than one dangerous situation and at least to me it is not obvious how to reactivate the window without wasting a turn.
I'd suggest to make that one click to activate the window not count as a movement-klick, if that is possible.